Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
BMS_1997Putative beta-lactamase family protein. (439 aa)    
Predicted Functional Partners:
BMS_1998
Conserved hypothetical protein.
       0.773
BMS_0481
Putative UDP-glucose 4-epimerase.
 
    0.726
BMS_1996
Putative exported protein.
       0.645
BMS_0271
Putative membrane protein.
  
     0.601
BMS_1999
4-hydroxyphenylpyruvate dioxygenase.
     
 0.492
BMS_3262
Putative exported protein.
  
     0.488
BMS_0482
Putative acyltransferase.
 
     0.487
echA8
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.480
paaG-2
Probable enoyl-CoA hydratase PaaG; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.480
accB-2
Carboxyltransferase subunit of acetyl-CoA carboxylase.
  
    0.472
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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