Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BMS_19994-hydroxyphenylpyruvate dioxygenase. (363 aa)    
Predicted Functional Partners:
BMS_0244
Putative homogentisate 1,2-dioxygenase.
 
 0.997
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.926
BMS_2649
Putative aspartate aminotransferase.
   
 
 0.913
aspC
Aspartate aminotransferase.
   
 
 0.913
BMS_2002
Putative phenylacetic acid degradation protein.
 
   
 0.826
paaG-2
Probable enoyl-CoA hydratase PaaG; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.806
echA8
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.805
BMS_1625
Putative dehydratase.
  
  
 0.759
accB-2
Carboxyltransferase subunit of acetyl-CoA carboxylase.
  
  
 0.753
kynA
Putative tryptophan oxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
 
  
 0.745
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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