Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
BMS_2091Putative exported endopeptidase protein; Belongs to the peptidase S1B family. (284 aa)    
Predicted Functional Partners:
BMS_1271
Putative general secretion pathway protein C.
  
     0.649
BMS_1386
Hypothetical protein.
  
     0.634
BMS_1360
Putative membrane protein.
  
     0.591
BMS_2089
Putative exported protein.
       0.586
BMS_2090
Putative exported protein.
       0.586
BMS_3245
Putative exported protein.
  
     0.586
BMS_0267
Putative membrane protein.
  
     0.568
BMS_0500
Putative lipoprotein; Belongs to the peptidase S1B family.
  
     0.528
BMS_2088
Putative protease; Belongs to the peptidase S1B family.
 
    
0.509
cpaC
Putative pilus assembly-related protein; Belongs to the bacterial secretin family.
  
     0.489
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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