Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BMS_2146Putative response regulator. (130 aa)    
Predicted Functional Partners:
BMS_2145
Conserved hypothetical protein.
       0.773
BMS_1564
Putative reponse regulator.
 
    0.772
BMS_2133
Putative putative C4-dicarboxylate transport sensor kinase.
 
 
   0.746
BMS_2826
Putative two-component system response regulator.
  
 
 
 0.739
BMS_2531
Putative two-component sensor histidine kinase.
  
 
   0.737
BMS_2743
Two-component system response regulator.
  
   0.729
BMS_2846
Putative chemotaxis protein.
  
     0.726
BMS_2847
Putative C4-dicarboxylate transport sensor protein.
  
 
   0.722
BMS_2347
Putative chemotaxis regulatory protein.
  
   0.716
BMS_0968
Putative two component sensor kinase.
  
 
   0.715
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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