STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_2223Hypothetical protein. (259 aa)    
Predicted Functional Partners:
BMS_2222
Hypothetical protein.
       0.773
BMS_0805
Putative antibiotic modification-related protein.
  
     0.739
BMS_2503
Hypothetical protein; Highly hidrophylic and coil-coiled.
  
     0.731
BMS_3180
Putative exported protein.
  
     0.710
BMS_1855
Conserved hypothetical protein.
  
     0.687
BMS_1425
Putative exported protein.
  
     0.658
BMS_1105
Putative membrane protein.
  
     0.634
BMS_2516
Putative lipoprotein.
  
     0.634
BMS_2960
Putative two-component system, sensor kinase.
  
     0.620
BMS_2074
Putative membrane protein.
  
     0.597
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.