STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_2226Conserved hypothetical protein. (414 aa)    
Predicted Functional Partners:
BMS_0267
Putative membrane protein.
  
     0.581
BMS_0318
Putative membrane protein.
  
     0.574
BMS_2586
Putative exported protein.
  
     0.564
BMS_0500
Putative lipoprotein; Belongs to the peptidase S1B family.
  
     0.562
BMS_2225
Putative UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family.
       0.552
BMS_1271
Putative general secretion pathway protein C.
  
     0.550
BMS_1474
Putative membrane protein.
  
     0.488
BMS_1019
Conserved hypothetical protein.
  
     0.482
BMS_2130
Putative S-adenosylmethionine decarboxylase.
  
     0.458
BMS_1377
Hypothetical protein.
  
     0.457
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.