STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_2261Putative histidine kinase. (393 aa)    
Predicted Functional Partners:
BMS_1309
Putative two component system histidine kinase/response regulator fusion protein.
 
 
 0.770
BMS_1518
Putative histidine kinase/response regulator fusion protein.
 
 
 0.741
BMS_2496
Putative histidine kinase/response regulator fusion protein.
 
 
 0.691
BMS_0897
Putative histidine kinase/response regulator fusion protein.
 
 
 
 0.634
BMS_1015
Putative two-component system sensor kinase.
  
 
   0.615
BMS_1613
Putative two-component system sensor kinase/response regulator fusion protein.
  
 
   0.604
BMS_2133
Putative putative C4-dicarboxylate transport sensor kinase.
  
 
   0.602
apbE
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
       0.588
BMS_2259
Putative periplasmic protein.
       0.587
BMS_2448
Putative response regulator.
  
   0.565
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.