STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrA-2Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (201 aa)    
Predicted Functional Partners:
msrB-2
Putative oxidoreductase; Belongs to the MsrB Met sulfoxide reductase family.
 
 0.966
msrB
Peptide methionine sulfoxide reductase msrB.
 
 0.965
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.867
BMS_0867
Putative exported protein.
  
 0.857
BMS_3272
Putative thioredoxin protein.
   
 0.770
BMS_3422
Putative periplasmic protein.
   
 0.770
BMS_2334
Putative membrane protein.
       0.723
BMS_1435
Putative peroxiredoxin/glutaredoxin family protein.
  
 
 0.708
dsbD
Putative thiol:disulfide interchange protein.
   
 
 0.699
BMS_0437
Putative mercury oxidoreductase.
 
  
 0.555
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.