STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_2364Putative regulatory protein. (138 aa)    
Predicted Functional Partners:
BMS_2172
Conserved hypothetical protein.
   
 0.952
cheA
Chemotaxis two-component sensor kinase.
  
 0.950
BMS_1309
Putative two component system histidine kinase/response regulator fusion protein.
 
 0.939
fliN
Flagellar motor switch protein FliN.
  
 
 0.925
BMS_2846
Putative chemotaxis protein.
   
  0.913
cheY-3
Chemotaxis protein CheY.
   
  0.910
BMS_2347
Putative chemotaxis regulatory protein.
   
  0.910
BMS_1079
Putative methyl-accepting chemotaxis protein.
  
 0.909
cheY
Chemotaxis protein cheY homologue.
     
  0.900
BMS_1535
Putative chemotaxis protein CheY.
     
 0.900
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.