STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_2507Putative exported protein. (286 aa)    
Predicted Functional Partners:
BMS_1401
Putative cytochrome C oxidase subunit; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.997
BMS_0207
Putative ubiquinol-cytochrome C reductase iron-sulfur subunit.
  
 
 0.890
BMS_0208
Putative ubiquinol-cytochrome C reductase cytochrome B subunit.
  
 
 0.856
BMS_0209
Putative cytochrome-related protein.
  
 
 0.856
ctaE
Putative transmembrane cytochrome oxidase subunit.
  
 
 0.817
BMS_0221
Putative cytochrome O ubiquinol oxidase.
  
 
 0.817
BMS_0210
Putative cytochrome-related protein.
  
 
 0.797
BMS_0219
Putative cytochrome c oxidase subunit II.
  
 
 0.767
ctaD
Cytochrome c oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.757
choD
Putative exported cholesterol oxidase.
   
 
 0.673
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.