STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_2655Conserved hypothetical protein. (543 aa)    
Predicted Functional Partners:
BMS_1119
Putative membrane protein.
  
     0.717
BMS_2802
Conserved hypothetical protein.
  
     0.713
BMS_3180
Putative exported protein.
  
     0.711
BMS_3335
Conserved hypothetical exported protein.
  
     0.703
BMS_1855
Conserved hypothetical protein.
  
     0.692
cpaC
Putative pilus assembly-related protein; Belongs to the bacterial secretin family.
  
     0.673
BMS_0861
Conserved hypothetical protein.
  
     0.661
BMS_2586
Putative exported protein.
  
     0.643
BMS_1271
Putative general secretion pathway protein C.
 
     0.642
BMS_1547
Conserved hypothetical protein.
  
     0.632
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.