STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_2662Putative glutathione synthetase. (316 aa)    
Predicted Functional Partners:
gshA
Putative glutamate-cysteine ligase.
 
  
 0.951
BMS_1178
Putative glutathione S-transferase; Belongs to the GST superfamily.
 
  
 0.934
BMS_1435
Putative peroxiredoxin/glutaredoxin family protein.
 
  
 0.934
BMS_0936
Putative aminopeptidase; Belongs to the peptidase M17 family.
   
 
 0.925
pepA
Putative leucine aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.925
ggt
Gamma-glutamyltranspeptidase precursor.
    
 0.921
pepN
Aminopeptidase N.
    
 0.914
gpo
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.913
BMS_0857
Putative glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.913
BMS_1633
Conserved hypothetical protein; Belongs to the glutathione peroxidase family.
    
 0.913
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.