STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crt13-hydroxybutyryl-CoA dehydratase (crotonase); Belongs to the enoyl-CoA hydratase/isomerase family. (269 aa)    
Predicted Functional Partners:
hbdA
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 0.999
bcd
acyl-CoA dehydrogenase, short-chain specific.
  
 0.986
fadB
Fatty acid oxidation complex subunit alpha.
 
0.945
echA8
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 
0.914
BMS_1518
Putative histidine kinase/response regulator fusion protein.
  
 
 0.785
BMS_2496
Putative histidine kinase/response regulator fusion protein.
   
 
 0.784
BMS_1481
Putative enoyl coenzyme A hydratase-like protein.
  
     0.774
BMS_0897
Putative histidine kinase/response regulator fusion protein.
   
 
 0.768
BMS_2866
Putative histidine kinase/response regulator fusion protein.
   
 
 0.768
BMS_2765
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.745
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.