STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_2777Hypothetical protein. (195 aa)    
Predicted Functional Partners:
BMS_2778
Conserved hypothetical protein; Belongs to the SUA5 family.
  
    0.791
BMS_2779
Hypothetical protein.
       0.773
BMS_2780
Putative membrane protein.
       0.610
BMS_2781
Putative membrane protein.
       0.610
BMS_2782
Putative ABC transport ATP-binding protein.
       0.598
BMS_2783
Putative membrane protein.
       0.598
BMS_1475
Putative methyltransferase.
  
  
 0.540
rsmI
Putative corrin/porphyrin methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.540
BMS_0953
Conserved hypothetical protein.
  
  
 0.531
yhbQ
Conserved hypothetical protein.
  
  
 0.531
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.