STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_2783Putative membrane protein. (292 aa)    
Predicted Functional Partners:
BMS_2781
Putative membrane protein.
 
 0.999
BMS_2782
Putative ABC transport ATP-binding protein.
 0.999
BMS_1890
Putative anit sigma factor antagonist.
   
   0.895
BMS_2849
Conserved hypothetical protein.
   
   0.766
BMS_2780
Putative membrane protein.
       0.757
BMS_0577
Putative outer membrane protein.
 
     0.739
BMS_2675
ABC transporter, ATP-binding protein.
  
  0.650
BMS_2778
Conserved hypothetical protein; Belongs to the SUA5 family.
  
    0.602
BMS_2777
Hypothetical protein.
       0.598
BMS_2779
Hypothetical protein.
       0.598
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.