Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BMS_2887Putative metal dependent phosphohydrolase. (407 aa)    
Predicted Functional Partners:
BMS_2753
Putative two-component response regulator with GGDEF sensory box protein.
 
 0.948
BMS_1301
Putative signaling protein.
 
 0.848
BMS_2437
Putative hydrolase.
  
     0.584
BMS_2888
Putative glycosyl transferase.
       0.523
BMS_2889
Putative exported protein.
       0.523
BMS_2890
Hypothetical protein.
       0.523
BMS_1518
Putative histidine kinase/response regulator fusion protein.
 
  
 0.428
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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