Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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[Homology]
Score
tkt-2Putative transketolase, thiamine disphosphate-binding N subunit. (265 aa)    
Predicted Functional Partners:
BMS_0336
Putative transketolase C-terminal part.
 0.999
tkt
Putative 1-deoxy-d-xylulose-5-phosphate synthase; Similar to C-terminus of Escherichia coli (strain K12) dxs 1-deoxy-d-xylulose-5-phosphate synthase (ec 2.2.1.7) (1-deoxyxylulose- 5-phosphate synthase) (dxp synthase) (dxps). UniProt:P77488 (619 aa) fasta scores: E()=3e-14, 28.195% id in 266 aa, and to entire Leptospira interrogans tktc1 transketolase c-terminal section (ec 2.2.1.1). UniProt:Q8F5T1 (EMBL:AE010300) (334 aa) fasta scores: E()=2.8e-47, 45.484% id in 310 aa; transketolase C-terminal subunit.
 0.999
rpe
Putative ribulose-phosphate 3-epimerase.
  
 0.996
BMS_1113
Putative transketolase.
 
  
 
0.933
tal
Putative transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
    
 0.914
BMS_0337
Putative transketolase, thiamine disphosphate-binding subunit.
  
  
 
0.913
rpiB
Ribose 5-phosphate isomerase.
    
 0.911
tpiA
Triosephosphate isomerase (TIM) (Triose-phosphate isomerase); Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
 0.908
fba
Putative fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
    
  0.906
gap
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
  0.906
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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