Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BMS_3201Putative response regulator in two-component regulatory system. (461 aa)    
Predicted Functional Partners:
rpoN
RNA polymerase sigma-54 factor (sigma-N); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.786
BMS_3200
Hypothetical protein.
       0.773
BMS_3198
Hypothetical protein.
       0.664
BMS_3202
Putative cell surface protein.
   
   0.562
fliM
Flagellar motor switch protein FliM.
  
  
 0.540
fliP
Flagellar biosynthesis protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.454
fliN
Flagellar motor switch protein FliN.
  
  
 0.438
BMS_1518
Putative histidine kinase/response regulator fusion protein.
  
 
 0.435
BMS_2854
Putative regulatory protein.
  
 
 0.430
fliF
Flagellar basal-body M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.425
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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