STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_3218Putative dehydrogenase. (353 aa)    
Predicted Functional Partners:
BMS_1185
Probable alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
0.942
aldH
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.915
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
    
 0.915
BMS_1792
Probable NADP-dependent alcohol dehydrogenase.
  
  
 
0.904
BMS_3217
Conserved hypothetical lipoprotein.
       0.766
maeB
NADP-dependent malate dehydrogenase (decarboxylating).
  
  
 0.668
BMS_1401
Putative cytochrome C oxidase subunit; Belongs to the heme-copper respiratory oxidase family.
  
    0.645
BMS_3214
Putative ketoreductase.
   
 
 0.629
BMS_3215
Putative tranport protein (MFS family).
       0.578
BMS_3216
Conserved hypothetical protein.
       0.572
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.