Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
icmFPutative methylmalonyl CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. (1056 aa)    
Predicted Functional Partners:
mutB
Putative methylmalonyl-CoA mutase large subunit.
  
 
 0.999
BMS_3250
Putative transport system kinase.
  
 
 0.983
BMS_3378
Putative vitamin B12 related cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
     
 0.816
BMS_1283
Putative lactoylglutathione lyase.
  
 
 0.751
BMS_1450
Putative two-component sensor kinase (pseudogene); HMMPfam hit to PF02518, ATP-binding region, ATPase-like, score 4.3e-29.
  
  
 0.642
BMS_1998
Conserved hypothetical protein.
  
  
 0.631
fadB
Fatty acid oxidation complex subunit alpha.
  
  
 0.629
maeB
NADP-dependent malate dehydrogenase (decarboxylating).
     
 0.623
BMS_0256
Putative iron-sulphur-binding reductase.
 
   
 0.585
hbdA
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 
   
 0.583
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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