STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS_3383Putative alkaline phosphatase synthesis sensor protein. (630 aa)    
Predicted Functional Partners:
BMS_0436
Putative two-component system, response regulator.
 
 
 
 0.881
BMS_2446
Putative two-component response regulator.
 
 0.867
BMS_0431
Putative positive response regulator for pho regulon, sensor is PhoR (or CreC).
 
 0.849
BMS_1769
Two-component response regulator.
 
 0.849
BMS_2743
Two-component system response regulator.
 
 0.844
BMS_2347
Putative chemotaxis regulatory protein.
 
 
 0.842
BMS_2056
Two-component response regulator.
 
 0.836
ntrC
Nitrogen regulation protein.
 
 
 0.831
phoB-2
Phosphate regulon transcriptional regulatory protein.
 
 0.830
rprY
Two-component system, transcriptional regulatory protein.
 
 0.825
Your Current Organism:
Halobacteriovorax marinus
NCBI taxonomy Id: 862908
Other names: Bacteriovorax marinus SJ, Bdellovibrio sp. SJ, H. marinus SJ, Halobacteriovorax marinus SJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.