STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frlRPutative GntR family transcriptional regulator. (238 aa)    
Predicted Functional Partners:
SCI_1587
GentR family transcriptional regulator.
  
     0.763
treR
Trehalose operon repressor.
  
     0.749
SCI_0072
Putative PTS phosphotransferase system sugar-specific EIIC component.
 
    0.706
SCI_0070
Putative beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
 
   
 0.662
SCI_0073
Putative mannose permease IID component.
 
    0.637
SCI_0074
Putative PTS system, mannose-specific IIA component.
 
    0.619
agaS
Putative sugar isomerase domain protein.
 
  
 0.589
SCI_0071
Putative phosphotransferase system sugar-specific EIIB component.
  
    0.584
SCI_1515
PTS system glucose-specific EIICBA component.
  
  
 0.565
scrA
PTS system, sucrose-specific IIABC component.
  
  
 0.565
Your Current Organism:
Streptococcus constellatus
NCBI taxonomy Id: 862969
Other names: S. constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis str. C1050, Streptococcus constellatus subsp. pharyngis strain C1050
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.