STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCI_0179Hypothetical protein. (244 aa)    
Predicted Functional Partners:
SCI_0184
Putative conjugal transfer protein.
 
     0.862
SCI_0182
Hypothetical protein.
 
   
 0.843
SCI_0195
Relaxase.
 
     0.805
SCI_0190
Putative conjugal transfer protein.
 
     0.775
SCI_0827
Putative relaxase.
 
     0.772
SCI_0816
Peptidase.
 
     0.771
SCI_0826
Hypothetical protein.
 
     0.730
SCI_0176
Hypothetical protein.
       0.723
SCI_0822
TraG family protein.
 
     0.715
SCI_0178
Hypothetical protein.
       0.714
Your Current Organism:
Streptococcus constellatus
NCBI taxonomy Id: 862969
Other names: S. constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis str. C1050, Streptococcus constellatus subsp. pharyngis strain C1050
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.