Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCI_0180Hypothetical protein. (137 aa)    
Predicted Functional Partners:
SCI_0179
Hypothetical protein.
       0.637
SCI_0176
Hypothetical protein.
       0.587
SCI_0178
Hypothetical protein.
       0.587
SCI_0177
Hypothetical protein.
       0.584
SCI_0181
Hypothetical protein.
       0.570
SCI_0182
Hypothetical protein.
       0.570
SCI_0183
Hypothetical protein.
       0.552
SCI_0184
Putative conjugal transfer protein.
       0.544
SCI_0185
Hypothetical protein.
       0.509
SCI_0186
Hypothetical protein.
       0.468
Your Current Organism:
Streptococcus constellatus
NCBI taxonomy Id: 862969
Other names: S. constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis str. C1050, Streptococcus constellatus subsp. pharyngis strain C1050
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