Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCI_0341HIT family protein. (136 aa)    
Predicted Functional Partners:
SCI_0340
Hypothetical protein.
       0.856
SCI_0342
ABC-type multidrug transport system/ ATPase component.
  
  
 0.814
SCI_0343
ABC transporter permease protein.
     
 0.808
SCI_0983
NAD-dependent deacetylase.
  
 
  0.777
glnA
Glutamine synthetase.
  
   0.716
udk
Uridine kinase.
   
  0.704
SCI_0344
Hypothetical protein.
     
 0.667
trmB
tRNA (guanine-N(7))-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.650
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.570
SCI_0350
Ribosomal protein L7A family protein.
 
    0.486
Your Current Organism:
Streptococcus constellatus
NCBI taxonomy Id: 862969
Other names: S. constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis str. C1050, Streptococcus constellatus subsp. pharyngis strain C1050
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