Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCI_0366 | SCI_0367 | SCI_0366 | SCI_0367 | Hypothetical protein. | Putative transcriptional regulator. | 0.709 |
| SCI_0366 | mraW | SCI_0366 | SCI_0368 | Hypothetical protein. | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.483 |
| SCI_0366 | trkA1 | SCI_0366 | SCI_0364 | Hypothetical protein. | Trk family potassium uptake protein. | 0.552 |
| SCI_0366 | trkH | SCI_0366 | SCI_0365 | Hypothetical protein. | Potassium uptake protein, TrkH family. | 0.559 |
| SCI_0367 | SCI_0366 | SCI_0367 | SCI_0366 | Putative transcriptional regulator. | Hypothetical protein. | 0.709 |
| SCI_0367 | mraW | SCI_0367 | SCI_0368 | Putative transcriptional regulator. | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.577 |
| SCI_0367 | trkA1 | SCI_0367 | SCI_0364 | Putative transcriptional regulator. | Trk family potassium uptake protein. | 0.519 |
| SCI_0367 | trkH | SCI_0367 | SCI_0365 | Putative transcriptional regulator. | Potassium uptake protein, TrkH family. | 0.522 |
| SCI_0726 | guaB | SCI_0726 | SCI_1928 | NOL1/NOP2/sun family protein. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.476 |
| SCI_0726 | mraW | SCI_0726 | SCI_0368 | NOL1/NOP2/sun family protein. | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.452 |
| SCI_0726 | pkn | SCI_0726 | SCI_0435 | NOL1/NOP2/sun family protein. | Putative serine/threonine protein kinase. | 0.461 |
| SCI_0726 | trkA1 | SCI_0726 | SCI_0364 | NOL1/NOP2/sun family protein. | Trk family potassium uptake protein. | 0.529 |
| copA | dnaJ | SCI_0142 | SCI_1617 | Copper-exporting ATPase. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.523 |
| copA | guaB | SCI_0142 | SCI_1928 | Copper-exporting ATPase. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.482 |
| copA | pkn | SCI_0142 | SCI_0435 | Copper-exporting ATPase. | Putative serine/threonine protein kinase. | 0.445 |
| copA | trkA1 | SCI_0142 | SCI_0364 | Copper-exporting ATPase. | Trk family potassium uptake protein. | 0.428 |
| dnaJ | copA | SCI_1617 | SCI_0142 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Copper-exporting ATPase. | 0.523 |
| dnaJ | guaB | SCI_1617 | SCI_1928 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.526 |
| dnaJ | trkA1 | SCI_1617 | SCI_0364 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Trk family potassium uptake protein. | 0.411 |
| guaB | SCI_0726 | SCI_1928 | SCI_0726 | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | NOL1/NOP2/sun family protein. | 0.476 |
page 1 of 3