Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCI_0442 | SCI_0444 | SCI_0442 | SCI_0444 | Hypothetical protein; Belongs to the UPF0374 family. | Putative aminoglycoside 3'-phosphotransferase; Belongs to the aminoglycoside phosphotransferase family. | 0.502 |
| SCI_0442 | recX | SCI_0442 | SCI_0443 | Hypothetical protein; Belongs to the UPF0374 family. | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.660 |
| SCI_0442 | rumA | SCI_0442 | SCI_0445 | Hypothetical protein; Belongs to the UPF0374 family. | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.412 |
| SCI_0444 | SCI_0442 | SCI_0444 | SCI_0442 | Putative aminoglycoside 3'-phosphotransferase; Belongs to the aminoglycoside phosphotransferase family. | Hypothetical protein; Belongs to the UPF0374 family. | 0.502 |
| SCI_0444 | recX | SCI_0444 | SCI_0443 | Putative aminoglycoside 3'-phosphotransferase; Belongs to the aminoglycoside phosphotransferase family. | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.648 |
| SCI_0444 | rumA | SCI_0444 | SCI_0445 | Putative aminoglycoside 3'-phosphotransferase; Belongs to the aminoglycoside phosphotransferase family. | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.610 |
| SCI_0726 | pheT | SCI_0726 | SCI_0695 | NOL1/NOP2/sun family protein. | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.674 |
| SCI_0726 | rsmI | SCI_0726 | SCI_0529 | NOL1/NOP2/sun family protein. | Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.562 |
| SCI_0726 | rumA | SCI_0726 | SCI_0445 | NOL1/NOP2/sun family protein. | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.664 |
| SCI_0726 | trmB | SCI_0726 | SCI_0345 | NOL1/NOP2/sun family protein. | tRNA (guanine-N(7))-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.715 |
| pheT | SCI_0726 | SCI_0695 | SCI_0726 | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | NOL1/NOP2/sun family protein. | 0.674 |
| pheT | rumA | SCI_0695 | SCI_0445 | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.469 |
| recX | SCI_0442 | SCI_0443 | SCI_0442 | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | Hypothetical protein; Belongs to the UPF0374 family. | 0.660 |
| recX | SCI_0444 | SCI_0443 | SCI_0444 | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | Putative aminoglycoside 3'-phosphotransferase; Belongs to the aminoglycoside phosphotransferase family. | 0.648 |
| recX | rumA | SCI_0443 | SCI_0445 | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.524 |
| rsmI | SCI_0726 | SCI_0529 | SCI_0726 | Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | NOL1/NOP2/sun family protein. | 0.562 |
| rsmI | rumA | SCI_0529 | SCI_0445 | Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.483 |
| rumA | SCI_0442 | SCI_0445 | SCI_0442 | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Hypothetical protein; Belongs to the UPF0374 family. | 0.412 |
| rumA | SCI_0444 | SCI_0445 | SCI_0444 | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Putative aminoglycoside 3'-phosphotransferase; Belongs to the aminoglycoside phosphotransferase family. | 0.610 |
| rumA | SCI_0726 | SCI_0445 | SCI_0726 | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | NOL1/NOP2/sun family protein. | 0.664 |
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