Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SCI_0710Hypothetical protein. (264 aa)    
Predicted Functional Partners:
SCI_0712
Putative transcriptional regulator.
 
  
 0.984
SCI_0711
Putative ABC transporter, ATP-binding protein.
 
    0.961
dnaE
DNA polymerase III, alpha subunit.
       0.674
SCI_0102
Putative ABC transporter ATP-binding protein.
 
    0.563
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
  
    0.545
SCI_1464
Hypothetical protein.
  
  
 0.538
SCI_1466
ABC superfamily ATP binding cassette transporter.
  
  
 0.535
sagD
Streptolysin S biosynthesis protein SagD.
 
  
 0.438
atpC
ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.434
sagG
Streptolysin S export protein SagG.
  
    0.433
Your Current Organism:
Streptococcus constellatus
NCBI taxonomy Id: 862969
Other names: S. constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis str. C1050, Streptococcus constellatus subsp. pharyngis strain C1050
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