STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCI_0907ABC transporter, ATP-binding protein. (327 aa)    
Predicted Functional Partners:
SCI_0906
Putative ABC transporter, permease protein.
 
  
 0.966
SCI_0905
Hypothetical protein.
 
  
 0.958
SCI_0840
ABC-2 type transport system permease protein.
 
  
 0.857
livF
Branched-chain amino acid transport protein.
 
     
0.850
SCI_0841
ABC-2 type transport system permease protein.
 
  
 0.825
SCI_1038
ABC transporter, ATP-binding protein.
 
     
0.793
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
     
0.659
SCI_1000
Putative ABC transporter, ATP-binding protein.
 
     
0.611
SCI_1381
Putative ABC transporter.
     
0.421
Your Current Organism:
Streptococcus constellatus
NCBI taxonomy Id: 862969
Other names: S. constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis str. C1050, Streptococcus constellatus subsp. pharyngis strain C1050
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.