Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tmpCPutative lipoprotein. (351 aa)    
Predicted Functional Partners:
SCI_1000
Putative ABC transporter, ATP-binding protein.
 
 
 0.997
SCI_0998
Putative ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.995
mglC
Putative ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.994
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
  
 0.841
pdp
Pyrimidine-nucleoside phosphorylase.
     
 0.825
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
     
 0.810
SCI_1005
Ribosomal RNA small subunit methyltransferase C.
       0.733
coaA
Pantothenate kinase.
       0.633
rpsT
Putative 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.585
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.488
Your Current Organism:
Streptococcus constellatus
NCBI taxonomy Id: 862969
Other names: S. constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis str. C1050, Streptococcus constellatus subsp. pharyngis strain C1050
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