Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCI_1302Hypothetical protein. (109 aa)    
Predicted Functional Partners:
SCI_1303
Hypothetical protein.
 
   
 0.901
SCI_1301
Hypothetical protein.
 
     0.868
SCI_1300
Putative phage-associated protein.
 
     0.826
SCI_1298
Hypothetical protein.
 
     0.808
SCI_1310
Hypothetical protein.
 
     0.788
SCI_1308
Putative integral membrane protein.
 
   
 0.774
SCI_1439
Hypothetical protein.
 
     0.761
SCI_1304
Putative ABC transporter, ATP-binding/permease protein.
 
    0.755
SCI_1315
Hypothetical protein.
  
     0.753
SCI_1307
Hypothetical protein.
 
     0.730
Your Current Organism:
Streptococcus constellatus
NCBI taxonomy Id: 862969
Other names: S. constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis str. C1050, Streptococcus constellatus subsp. pharyngis strain C1050
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