Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
hmuVPutative ABC transporter, ATP-binding protein. (239 aa)    
Predicted Functional Partners:
SCI_1673
ABC transporter, permease component.
 
 0.999
SCI_1674
Putative metal ABC transporter substrate-binding lipoprotein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.999
adcA
Zinc-binding lipoprotein AdcA; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.988
adcB
ABC transporter permease.
 
 
 0.948
dtxR
Putative transcriptional regulator.
 
  
 0.892
SCI_0759
Metal binding lipoprotein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.883
pepO
Putative endopeptidase O.
     
 0.726
perR
Putative Fe/Zn uptake regulation protein; Belongs to the Fur family.
  
  
 0.501
SCI_1926
Hypothetical protein.
  
    0.471
copA
Copper-exporting ATPase.
     
 0.449
Your Current Organism:
Streptococcus constellatus
NCBI taxonomy Id: 862969
Other names: S. constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis C1050, Streptococcus constellatus subsp. pharyngis str. C1050, Streptococcus constellatus subsp. pharyngis strain C1050
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