Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SANR_0204PTS system enzyme IIA component. (152 aa)    
Predicted Functional Partners:
SANR_0206
PTS system enzyme IIC component.
 
 
 0.995
SANR_0205
PTS system enzyme IIB component.
 
 
 0.994
SANR_0203
Hypothetical protein.
 
  
 0.919
ptsH
Phosphocarrier protein HPr.
  
 
 0.914
gatC_2
Putative PTS system IIC component.
 
  
 0.874
rhaD
Rhamnulose-1-phosphate aldolase.
 
  
 0.729
SANR_1496
Putative PTS system, IIB component.
 
  
 0.724
fruA
Putative PTS system, fructose-specific enzyme IIABC component.
  
  
 0.609
SANR_1700
Putative PTS system, IIA component.
 
  
 0.590
fruB
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.503
Your Current Organism:
Streptococcus anginosus
NCBI taxonomy Id: 862971
Other names: S. anginosus C238, Streptococcus anginosus C238, Streptococcus anginosus str. C238, Streptococcus anginosus strain C238
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