Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SANR_1847Hypothetical protein. (424 aa)    
Predicted Functional Partners:
SANR_1848
Hypothetical protein.
     
 0.746
SANR_1846
Hypothetical protein.
       0.737
cobB
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
   
   0.721
SANR_1849
Conjugative transposon conserved hypothetical protein.
 
     0.562
SANR_1175
Hypothetical protein.
 
     0.538
SANR_0085
Sugar ABC transporter, sugar-binding protein.
  
     0.502
SANR_1850
Hypothetical protein.
       0.448
SANR_1176
Transcriptional regulator, XRE superfamily.
 
     0.430
Your Current Organism:
Streptococcus anginosus
NCBI taxonomy Id: 862971
Other names: S. anginosus C238, Streptococcus anginosus C238, Streptococcus anginosus str. C238, Streptococcus anginosus strain C238
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