Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SANR_2011Hypothetical protein; Belongs to the UPF0297 family. (102 aa)    
Predicted Functional Partners:
SANR_2010
Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
 
    0.976
SANR_2009
Hypothetical protein; Belongs to the UPF0473 family.
  
  
 0.860
SANR_0659
Hypothetical protein.
  
     0.724
ylxR
Hypothetical protein.
  
   
 0.723
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.685
SANR_1020
Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
 
   
 0.679
SANR_0950
Hypothetical protein.
 
   
 0.678
polC
DNA polymerase III subunit alpha, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
     0.661
SANR_2107
Hypothetical protein.
      
 0.628
SANR_0358
Hypothetical protein.
 
  
 0.605
Your Current Organism:
Streptococcus anginosus
NCBI taxonomy Id: 862971
Other names: S. anginosus C238, Streptococcus anginosus C238, Streptococcus anginosus str. C238, Streptococcus anginosus strain C238
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