STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001187555_00123Unannotated protein. (155 aa)    
Predicted Functional Partners:
GCA_001187555_00121
Unannotated protein.
 
 0.999
GCA_001187555_00122
Unannotated protein.
 
 
 0.999
GCA_001187555_00120
Unannotated protein.
 
 0.998
GCA_001187555_00128
Unannotated protein.
 
 
 0.986
GCA_001187555_00124
Unannotated protein.
  
  
 0.976
GCA_001187555_00251
Unannotated protein.
  
  
 0.858
GCA_001187555_02431
Unannotated protein.
  
 
 0.849
GCA_001187555_00125
Unannotated protein.
  
  
 0.846
GCA_001187555_02914
Unannotated protein.
  
    0.777
GCA_001187555_03137
Unannotated protein.
   
    0.771
Your Current Organism:
Gilvimarinus polysaccharolyticus
NCBI taxonomy Id: 863921
Other names: G. polysaccharolyticus, Gilvimarinus polysaccharolyticus Cheng et al. 2015, Gilvimarinus sp. YN3, JCM 19198, KCTC 32438, strain YN3
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.