STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001187555_00770Unannotated protein. (616 aa)    
Predicted Functional Partners:
GCA_001187555_00771
Unannotated protein.
 
 
 0.992
GCA_001187555_00772
Unannotated protein.
 
 
 0.992
GCA_001187555_00773
Unannotated protein.
 
 
 0.991
GCA_001187555_02563
Unannotated protein.
  
  
 0.879
GCA_001187555_01999
Unannotated protein.
     
 0.860
GCA_001187555_02082
Unannotated protein.
  
  
  0.854
GCA_001187555_02001
Unannotated protein.
     
 0.853
GCA_001187555_01886
Unannotated protein.
     
 0.850
GCA_001187555_02616
Unannotated protein.
     
 0.846
GCA_001187555_01600
Unannotated protein.
     
 0.838
Your Current Organism:
Gilvimarinus polysaccharolyticus
NCBI taxonomy Id: 863921
Other names: G. polysaccharolyticus, Gilvimarinus polysaccharolyticus Cheng et al. 2015, Gilvimarinus sp. YN3, JCM 19198, KCTC 32438, strain YN3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.