STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001187555_02626Unannotated protein. (629 aa)    
Predicted Functional Partners:
GCA_001187555_00657
Unannotated protein.
 
  
 0.992
GCA_001187555_02029
Unannotated protein.
     
 0.952
GCA_001187555_02627
Unannotated protein.
 
  
 0.839
GCA_001187555_01401
Unannotated protein.
 
   
 0.823
GCA_001187555_00255
Unannotated protein.
 
  
 0.786
GCA_001187555_01045
Unannotated protein.
 
   
 0.779
GCA_001187555_01402
Unannotated protein.
  
  
 0.767
GCA_001187555_02628
Unannotated protein.
     
 0.731
GCA_001187555_00857
Unannotated protein.
    
 0.701
GCA_001187555_01592
Unannotated protein.
  
   
 0.663
Your Current Organism:
Gilvimarinus polysaccharolyticus
NCBI taxonomy Id: 863921
Other names: G. polysaccharolyticus, Gilvimarinus polysaccharolyticus Cheng et al. 2015, Gilvimarinus sp. YN3, JCM 19198, KCTC 32438, strain YN3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.