STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR68920.1Hypothetical protein. (201 aa)    
Predicted Functional Partners:
EHR68916.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; PFAM: Type II/IV secretion system protein.
       0.773
EHR68917.1
Hypothetical protein.
       0.773
EHR68918.1
PFAM: Fimbrial assembly protein (PilN).
       0.773
EHR68919.1
Hypothetical protein.
       0.773
EHR68921.1
Type II secretory pathway, component HofQ; PFAM: Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein.
       0.773
EHR68914.1
PFAM: Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G.
       0.757
EHR68915.1
Type II secretory pathway, component PulF; PFAM: Bacterial type II secretion system protein F domain.
       0.757
EHR68922.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; overlaps another CDS with the same product name.
       0.737
EHR68923.1
PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; overlaps another CDS with the same product name.
       0.737
EHR68924.1
Hypothetical protein.
       0.737
Your Current Organism:
Burkholderiales bacterium JOSHI001
NCBI taxonomy Id: 864051
Other names: B. bacterium JOSHI_001, Burkholderiales bacterium JOSHI_001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.