STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR69085.1PFAM: PhoD-like phosphatase. (508 aa)    
Predicted Functional Partners:
EHR70562.1
PFAM: Glycerophosphoryl diester phosphodiesterase family.
 
 
 0.670
EHR69084.1
Hypothetical protein.
       0.605
EHR69839.1
PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain.
  
  
  0.587
EHR69086.1
Putative permease; PFAM: Membrane transport protein.
       0.512
EHR69811.1
PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain.
  
 
 0.509
EHR73312.1
PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain.
  
 
 0.509
nadK
Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
     
  0.499
EHR69759.1
PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I.
    
 0.486
EHR69817.1
Putative phosphatase; PFAM: Bacterial protein of unknown function (DUF839).
 
  
 0.480
rep
DNA/RNA helicase, superfamily I; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.
 
     0.452
Your Current Organism:
Burkholderiales bacterium JOSHI001
NCBI taxonomy Id: 864051
Other names: B. bacterium JOSHI_001, Burkholderiales bacterium JOSHI_001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.