STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR69371.1PFAM: Biopolymer transport protein ExbD/TolR. (139 aa)    
Predicted Functional Partners:
EHR69372.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
 
 
 0.971
EHR69373.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
 
 0.936
EHR73434.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
 
 
 0.899
EHR70464.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
 
 
 0.889
tolQ
TolQ protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.885
EHR69804.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family; Domain of unknown function (DUF2341).
 
 
 0.812
EHR69369.1
Putative iron-regulated protein; PFAM: 2OG-Fe(II) oxygenase superfamily.
  
    0.793
EHR69370.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor.
  
  
 0.785
EHR69368.1
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase.
  
    0.769
pal
Outer membrane protein/peptidoglycan-associated (lipo)protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 
 0.740
Your Current Organism:
Burkholderiales bacterium JOSHI001
NCBI taxonomy Id: 864051
Other names: B. bacterium JOSHI_001, Burkholderiales bacterium JOSHI_001
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.