STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR69574.1PFAM: Bacterial regulatory proteins, gntR family; FCD domain. (289 aa)    
Predicted Functional Partners:
EHR69575.1
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase.
 
     0.821
EHR72756.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
  
 0.768
EHR73637.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
  
 0.756
EHR72186.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
  
 0.677
EHR72035.1
Putative Fe-S protein; TIGRFAM: reductive dehalogenase.
    
  0.660
EHR72714.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit.
    
  0.649
EHR69578.1
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase; PFAM: Class II Aldolase and Adducin N-terminal domain.
 
     0.620
EHR69577.1
PFAM: Protein of unknown function, DUF1537.
 
     0.605
EHR70929.1
PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
  
    0.579
EHR69571.1
Putative metal-dependent hydrolase; PFAM: Protein of unknown function DUF45.
       0.537
Your Current Organism:
Burkholderiales bacterium JOSHI001
NCBI taxonomy Id: 864051
Other names: B. bacterium JOSHI_001, Burkholderiales bacterium JOSHI_001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.