STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR70141.1EpsI family protein; PFAM: Protein of unknown function (DUF3485); TIGRFAM: EpsI family protein. (233 aa)    
Predicted Functional Partners:
EHR70140.1
Exosortase 2; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase 2; eight transmembrane protein EpsH (proposed exosortase).
 
     0.953
EHR70138.1
PFAM: Chain length determinant protein; TIGRFAM: chain length determinant protein EpsF.
 
     0.942
EHR70136.1
TIGRFAM: peptidyl-prolyl cis-trans isomerase, EpsD family.
 
     0.934
EHR70137.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; TIGRFAM: polysaccharide export protein EpsE.
 
     0.913
EHR70139.1
PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; chain length determinant protein tyrosine kinase EpsG.
 
     0.848
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
       0.795
EHR70169.1
Hypothetical protein (DUF2320); PFAM: Uncharacterized protein conserved in bacteria (DUF2320).
 
     0.746
EHR73250.1
PFAM: PEP-CTERM motif; CHRD domain; TIGRFAM: Deltaproteobacterial GC-motif protein sorting domain; PEP-CTERM putative exosortase interaction domain.
  
     0.730
EHR73470.1
Type II secretory pathway, pseudopilin PulG.
  
     0.641
EHR73466.1
Hypothetical protein.
  
     0.637
Your Current Organism:
Burkholderiales bacterium JOSHI001
NCBI taxonomy Id: 864051
Other names: B. bacterium JOSHI_001, Burkholderiales bacterium JOSHI_001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.