STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR71203.1PFAM: Plasmid stabilisation system protein. (127 aa)    
Predicted Functional Partners:
EHR71204.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.783
EHR71266.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.776
EHR72064.1
Hypothetical protein.
  
 
 0.774
EHR69781.1
PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: putative addiction module antidote protein, CC2985 family.
  
 
 0.742
EHR70993.1
PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: putative addiction module antidote protein, CC2985 family.
  
 
 0.742
EHR71205.1
PFAM: Protein of unknown function (DUF1173).
       0.645
EHR71206.1
Hypothetical protein.
       0.645
EHR71207.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
       0.538
EHR71208.1
Type IV secretory pathway, VirD4 component; PFAM: TraG/TraD family.
  
    0.486
EHR71209.1
P-type DNA transfer ATPase VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.
       0.476
Your Current Organism:
Burkholderiales bacterium JOSHI001
NCBI taxonomy Id: 864051
Other names: B. bacterium JOSHI_001, Burkholderiales bacterium JOSHI_001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.