STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR71994.1PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing). (560 aa)    
Predicted Functional Partners:
EHR70029.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
  
 
 0.757
EHR70945.1
PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.750
EHR71986.1
PFAM: O-Antigen ligase; TIGRFAM: probable O-glycosylation ligase, exosortase system type 1-associated.
 
    0.723
argG
PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
   
 0.706
EHR71970.1
Pyridoxal-dependent decarboxylase, exosortase system type 1 associated; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; pyridoxal-dependent decarboxylase, exosortase system type 1 associated.
 
  
 0.692
pyrB
PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.688
EHR71999.1
Asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; TIGRFAM: exosortase 1 system-associated amidotransferase 1; asparagine synthase (glutamine-hydrolyzing).
 
  
 
0.686
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.679
EHR71997.1
PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing).
 
  
 
0.678
EHR72002.1
PFAM: FemAB family; TIGRFAM: FemAB-related protein, PEP-CTERM system-associated.
 
     0.672
Your Current Organism:
Burkholderiales bacterium JOSHI001
NCBI taxonomy Id: 864051
Other names: B. bacterium JOSHI_001, Burkholderiales bacterium JOSHI_001
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