STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolD-2ABC-type antimicrobial peptide transport system, ATPase component; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (241 aa)    
Predicted Functional Partners:
EHR69965.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 0.986
EHR73484.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
 0.984
lolA
Periplasmic chaperone LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.869
EHR70624.1
PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family.
 
 0.867
EHR71960.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
 0.839
EHR73483.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.827
EHR70447.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
 0.817
EHR72452.1
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: ABC transporter.
  
   0.804
EHR72818.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
 0.768
EHR73486.1
PFAM: Conserved region in glutamate synthase; Belongs to the glutamate synthase family.
       0.757
Your Current Organism:
Burkholderiales bacterium JOSHI001
NCBI taxonomy Id: 864051
Other names: B. bacterium JOSHI_001, Burkholderiales bacterium JOSHI_001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.