STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001906585_00474Unannotated protein. (820 aa)    
Predicted Functional Partners:
GCA_001906585_01591
Unannotated protein.
  
  
 0.937
GCA_001906585_06374
Unannotated protein.
     
 0.931
GCA_001906585_02565
Unannotated protein.
  
  
 
0.926
GCA_001906585_03727
Unannotated protein.
   
 
 0.898
GCA_001906585_04659
Unannotated protein.
  
  
0.853
GCA_001906585_00473
Unannotated protein.
 
  
 0.824
GCA_001906585_02486
Unannotated protein.
   
 
 0.777
GCA_001906585_05345
Unannotated protein.
   
 
 0.777
GCA_001906585_05430
Unannotated protein.
   
 
 0.777
GCA_001906585_00477
Unannotated protein.
     
 0.752
Your Current Organism:
Streptomyces kebangsaanensis
NCBI taxonomy Id: 864058
Other names: DSM 42048, NRRL B-24860, S. kebangsaanensis, Streptomyces kebangsaanensis Mohd et al. 2013, Streptomyces sp. SUK12, strain SUK12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.