STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001906585_00633Unannotated protein. (466 aa)    
Predicted Functional Partners:
GCA_001906585_00601
Unannotated protein.
  
  
 0.952
GCA_001906585_00602
Unannotated protein.
  
  
 0.952
GCA_001906585_00608
Unannotated protein.
  
  
 0.933
GCA_001906585_00605
Unannotated protein.
  
  
 0.931
GCA_001906585_02796
Unannotated protein.
  
  
 0.926
GCA_001906585_00607
Unannotated protein.
  
  
 0.885
GCA_001906585_00604
Unannotated protein.
  
  
 0.872
GCA_001906585_00374
Unannotated protein.
  
  
 0.863
GCA_001906585_04642
Unannotated protein.
  
  
 0.863
GCA_001906585_00603
Unannotated protein.
  
  
 0.861
Your Current Organism:
Streptomyces kebangsaanensis
NCBI taxonomy Id: 864058
Other names: DSM 42048, NRRL B-24860, S. kebangsaanensis, Streptomyces kebangsaanensis Mohd et al. 2013, Streptomyces sp. SUK12, strain SUK12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.