STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001906585_01576Unannotated protein. (240 aa)    
Predicted Functional Partners:
GCA_001906585_00366
Unannotated protein.
   
 
 0.858
GCA_001906585_00743
Unannotated protein.
  
 0.849
GCA_001906585_05264
Unannotated protein.
  
 0.849
GCA_001906585_00566
Unannotated protein.
   
    0.831
GCA_001906585_05851
Unannotated protein.
   
    0.831
GCA_001906585_06563
Unannotated protein.
  
 0.806
GCA_001906585_05435
Unannotated protein.
    
  0.789
GCA_001906585_03019
Unannotated protein.
  
 
 0.731
GCA_001906585_03956
Unannotated protein.
  
 
 0.731
GCA_001906585_01577
Unannotated protein.
 
     0.693
Your Current Organism:
Streptomyces kebangsaanensis
NCBI taxonomy Id: 864058
Other names: DSM 42048, NRRL B-24860, S. kebangsaanensis, Streptomyces kebangsaanensis Mohd et al. 2013, Streptomyces sp. SUK12, strain SUK12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.