STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM30963.1Hypothetical protein. (112 aa)    
Predicted Functional Partners:
EIM30959.1
PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Type II intron maturase.
 
     0.787
EIM30962.1
Hypothetical protein.
       0.773
EIM30983.1
PFAM: Reverse transcriptase (RNA-dependent DNA polymerase).
 
     0.770
EIM30654.1
PFAM: Reverse transcriptase (RNA-dependent DNA polymerase).
  
     0.749
EIM31137.1
Retron-type reverse transcriptase; PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase).
  
     0.745
EIM24352.1
PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain.
  
     0.721
EIM30961.1
Hypothetical protein.
       0.639
EIM30960.1
Site-specific recombinase, DNA invertase Pin; PFAM: Resolvase, N terminal domain.
 
     0.531
EIM30723.1
Site-specific recombinase, DNA invertase Pin; PFAM: Recombinase; Resolvase, N terminal domain.
  
     0.400
Your Current Organism:
Microvirga lotononidis
NCBI taxonomy Id: 864069
Other names: HAMBI 3237, LMG 26455, LMG:26455, M. lotononidis, Microvirga lotononidis Ardley et al. 2012, Microvirga sp. WSM3557, Rhizobiales bacterium WSM3557, strain WSM3557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.